ODEMEX: CVode wrapper for Matlab

by Joep Vanlier and Natal van Riel

Systems Biology employs mathematical modelling of biological reaction networks by systems of nonlinear differential equations.

The ODEMEX package can generate compiled MEX files for the simulation of Ordinary Differential Equation (ODE) models, composed of systems of coupled 1st order ODEs.

The CVode Wrapper package for Matlab includes:

See also 'Speeding up simulations of ODE models in Matlab using CVode and MEX files'.

 


Software can be used under GNU General Public License. See http://www.gnu.org/copyleft/gpl for terms and conditions.

In case you use the wrapper and publish results obtained with the software, please refer to the following paper: Bioinformatics, 2012; 28(8): 1130-5.